{"id":14151,"date":"2020-08-05T23:08:42","date_gmt":"2020-08-05T15:08:42","guid":{"rendered":"https:\/\/www.bihec.com\/olisclarity\/?p=14151"},"modified":"2020-08-05T23:08:42","modified_gmt":"2020-08-05T15:08:42","slug":"reduced-minus-oxidized-difference-spectra-of-live-cells-using-the-olis-clarity-dynamic-regulation-of-nadph-oxidase-5-by-intracellular-heme-levels-and-cellular-chaperones","status":"publish","type":"post","link":"https:\/\/www.bihec.com\/olisclarity\/reduced-minus-oxidized-difference-spectra-of-live-cells-using-the-olis-clarity-dynamic-regulation-of-nadph-oxidase-5-by-intracellular-heme-levels-and-cellular-chaperones\/","title":{"rendered":"Reduced minus oxidized difference spectra of live cells using the Olis Clarity: Dynamic regulation of NADPH oxidase 5 by intracellular heme levels and cellular chaperones"},"content":{"rendered":"
NADPH oxidase 5 (NOX5) is a transmembrane signaling enzyme that produces superoxide in response to elevated cytosolic calcium. In addition to its association with numerous human diseases, NOX5 has recently been discovered to play crucial roles in the immune response and cardiovascular system. Details of NOX5 maturation, and specifically its response to changes in intracellular heme levels have remained unclear. Here we establish an experimental system in mammalian cells that allows us to probe the influence of heme availability on ROS production by NOX5. We identified a mode of dynamic regulatory control over NOX5 activity through modulation of its heme saturation and oligomeric state by intracellular heme levels and Hsp90 binding. This regulatory mechanism allows for fine-tuning and reversible modulation of NOX5 activity in response to stimuli.<\/p>\n
The biological role of NADPH oxidase (NOX) enzymes (EC 1.6.3) is to generate reactive oxygen species (ROS) such as superoxide and H2<\/sub>O2<\/sub>\u00a0in a controlled fashion for cellular processes. ROS production must be tightly regulated because elevated levels are implicated in aging and human disease [[1]<\/a>,\u00a0[2]<\/a>,\u00a0[3]<\/a>,\u00a0[4]<\/a>,\u00a0[5]<\/a>,\u00a0[6]<\/a>,\u00a0[7]<\/a>,\u00a0[8]<\/a>,\u00a0[9]<\/a>,\u00a0[10]<\/a>,\u00a0[11]<\/a>,\u00a0[12]<\/a>,\u00a0[13]<\/a>,\u00a0[14]<\/a>,\u00a0[15]<\/a>,\u00a0[16]<\/a>], while lower than optimal levels can disrupt cell signaling [7<\/a>,10<\/a>], proliferation [15<\/a>,17<\/a>], vasodilation [15<\/a>,18<\/a>], protein phosphorylation [13<\/a>,19<\/a>], and host defense [[20]<\/a>,\u00a0[21]<\/a>,\u00a0[22]<\/a>].<\/p>\n The mammalian NOX family is comprised of seven members: NOX1-5, DUOX1 and DUOX2. NOX enzymes share a number of conserved features including six transmembrane domains and cytosolic N and C termini, with C-terminal NADPH and FAD binding sites. Four highly conserved heme ligating histidine residues bind two heme groups within the membrane [10<\/a>]. NOX enzymes transfer NADPH electrons through FAD to the membrane-bound hemes and finally to oxygen, producing superoxide or H2<\/sub>O2<\/sub>\u00a0[23<\/a>,24<\/a>].<\/p>\n NOX5 is a Ca2+<\/sup>-responsive NADPH oxidase implicated in a number of human diseases, such as cancer [25<\/a>,26<\/a>], diabetes [14<\/a>,27<\/a>], and cardiovascular disorders [[28]<\/a>,\u00a0[29]<\/a>,\u00a0[30]<\/a>,\u00a0[31]<\/a>,\u00a0[32]<\/a>,\u00a0[33]<\/a>,\u00a0[34]<\/a>]. More recent work has begun to uncover NOX5’s physiological roles in human health. NOX5 was identified as a regulator of vascular contraction, linking Ca2+<\/sup>\u00a0and redox signaling [35<\/a>], discovered to be a key driver in the differentiation of circulating monocytes into dendritic cells [36<\/a>] and found to be required for the differentiation of oligodendrocytes [37<\/a>]. Dysregulation of NOX5 is associated with amplified Ca2+<\/sup>\u00a0signaling, vascular hypercontractility and cardiac fibrosis [35<\/a>]. The peptide hormones angiotensin-II (Ang-II) and endothelin-1 (ET-1) increase NOX5 expression and activity [30<\/a>,35<\/a>], as do the kinases protein kinase C \u03b1 (PKC\u03b1) [[38]<\/a>,\u00a0[39]<\/a>,\u00a0[40]<\/a>], calcium and calmodulin-dependent protein kinase II (CAMKII) [41<\/a>], and c-Abl kinase [42<\/a>]. Despite its apparent importance in human health and disease, NOX5 is mysteriously missing in mice and rats, making it difficult to study its effects in mammals.<\/p>\n NOX5 activity is regulated at the post-translational level through protein phosphorylation [[38]<\/a>,\u00a0[39]<\/a>,\u00a0[40]<\/a>,\u00a0[41]<\/a>,\u00a0[42]<\/a>], S-nitrosation (SNO) [43<\/a>], and protein-protein interactions [44<\/a>]. However, little is known about the NOX5 maturation process and the factors that control it. Although some facets of maturation of the prototypical NOX, NOX2, are known, it is likely that those details are not relevant to NOX5. NOX2 is highly glycosylated and its activity requires interactions with the membrane protein p22phox<\/sup>\u00a0and the cytosolic factors p47phox, p67phox, p40phox and Rac [10<\/a>,20<\/a>]. In contrast, NOX5 is not glycosylated and its activity is not dependent upon p22phox<\/sup>\u00a0or cytosolic factors, but is instead activated by Ca2+<\/sup>\u00a0binding to its EF hand domains [10<\/a>,20<\/a>]. Additionally, there remains the question of when, where and how heme insertion takes place in NOX5, and how changes in intracellular heme levels impact NOX5 superoxide generation. Increased intracellular heme levels have been shown to effect cells in an NAPDH oxidase dependent manner, including inflammatory responses in alveolar macrophages [45<\/a>] and activation of intestinal epithelial cells [46<\/a>]. As NOX5 has been found to play crucial roles in immunity and cardiovascular function, and stands as a nexus of calcium-redox signaling in the cell, understanding how NOX5 responds to changes in intracellular heme levels is crucial to understanding its regulation and role in driving cellular responses associated with changes in cellular heme content.<\/p>\n Recent work in our lab and others has shown that Hsp90 is directly involved in heme insertion into a number of heme proteins such as soluble guanylate cyclase (sGC) [47<\/a>,48<\/a>], inducible nitric oxide (NO) synthase [49<\/a>], hemoglobin \u03b2 and \u03b3 [50<\/a>], and myoglobin [51<\/a>]. Whether this reliance on Hsp90 is conserved for integral membrane heme proteins like the NOX family remains unclear. Inhibition of Hsp90 has been shown to decrease the activity of NOX5 [52<\/a>], but whether this occurs through inhibition of heme insertion or through other mechanisms is unknown. Additionally, whether heme must be inserted co-translationally, or post-translationally is unresolved. We sought to understand the maturation and regulation of NOX5 in terms of heme binding, and the role of Hsp90.<\/p>\n To address these questions, we developed an experimental system in which cells express and accumulate heme-free (apo) NOX5. Then, we probed the effects of heme or Hsp90 inhibition on the ability of apo-NOX5 to obtain heme and regain activity. We found: (i) apo-NOX5 builds up to a significant extent in both normal and heme-depleted cells. (ii) Upon heme addition apo-NOX5 becomes fully active. (iii) Hsp90 inhibition blocks the heme-dependent stimulation of NOX5. (vi) Heme and Hsp90 regulate NOX5 activity by regulating its oligomerization status in a dynamic manner. Such multi-level post-translational regulation of NOX5 is novel and has important implications for understanding its emerging roles in physiology and disease.<\/p>\n<\/section>\n COS-7 (ATCC), HEK293 (ATCC) and HEK293\u00a0cells stably expressing NOX5 [53<\/a>] were maintained in Dulbecco’s modified Eagle’s medium (DMEM) with 10% FBS and antibiotic-antimycotic (Gibco, 1X, COS-7 and HEK293\u00a0cells) or G418 (Gibco, 400\u00a0\u03bcg\/mL, HEK293\u00a0cells stably expressing NOX5) at 37\u00a0\u00b0C with 5% CO2<\/sub>\u00a0in a humidified incubator. PC-3\u00a0cells were maintained in Kaighn’s Modification of Ham’s F-12 Media (ATCC, F\u201312\u00a0K) with 10% FBS and antibiotic-antimycotic. BET1A cells [54<\/a>], human bronchial epithelial cells transformed with SV40, were cultured as described [55<\/a>] in serum-free LHC9 media with penicillin\/streptomycin on plates precoated with coating media (LHC basal, Biofluids\/Biosource) containing 0.03\u00a0mg\/mL collagen (Vitrogen, Cohesion Technologies), 0.01\u00a0mg\/mL BSA (Biofluids\/Biosource) and 0.01\u00a0mg\/mL fibronectin (Cal Biochem). For transfection, COS-7 or HEK293\u00a0cells were grown in DMEM with 10% FBS and no antibiotic. Cells were transfected with 5\u00a0\u03bcg DNA and 15\u00a0\u03bcL Lipofectamine 2000 (ThermoFisher Scientific) per 10\u00a0cm dish. Sixteen hours after transfection the media was changed to DMEM with 10% FBS and 1X antibiotic-antimycotic. For heme-depleted conditions, the media was made with heme-depleted FBS. Heme-depleted FBS was made by treating serum with 10\u00a0mM ascorbic acid until absorbance at 405\u00a0nm had decreased by half, followed by dialysis against PBS and sterile filtration [56<\/a>]. Cells grown in this heme-depleted (HD) media were then treated with 400\u00a0\u03bcM succinyl acetone (Sigma-Aldrich) for three days to inhibit heme synthesis and deplete cellular heme reserves.<\/p>\n<\/section>\n Cell lysates were normalized to total protein content as determined by a DC protein assay (Bio-Rad). SDS-PAGE and Western blot analysis were performed using standard procedures with antibodies against NOX5 (Proteintech), Hsp90 (Abcam) and \u03b2-actin (Sigma-Aldrich). Horseradish peroxidase-linked secondary antibodies (anti-rabbit: Cell Signaling Technologies, anti-mouse: Abcam) were used to visualize the proteins using a Western Lightning Plus-ECL kit from PerkinElmer Life Sciences. Blots were imaged on a Bio-Rad ChemiDoc Imaging System and analyzed using Bio-Rad Image Lab software v5.2.1.<\/p>\n<\/section>\n HEK293\u00a0cells and heme-depleted HEK293\u00a0cells were transfected with pcDNA3.1-HS1 [57<\/a>] heme sensor as described above. At 16\u00a0h post-transfection, media was replaced with corresponding media and treated with 5\u00a0\u03bcM hemin for 2\u00a0h. Cells were removed from the dish, washed 1X with 1X PBS, and re-suspended in 1X PBS\u00a0+\u00a0glucose. 100,000 mKATE2 positive cells were analyzed on a Becton-Dickinson LSRFortessa for mKATE2 (excitation (ex.)\u00a0=\u00a0588\u00a0nm, emission (em.)\u00a0=\u00a0620\u00a0nm) and GFP (ex.\u00a0=\u00a0488\u00a0nm, em.\u00a0=\u00a0510\u00a0nm). Data was analyzed using FlowJo v10.<\/p>\n<\/section>\n The Olis Clarity is a specialized spectrophotometer that takes absorbance measurements in the UV\u2013visible range in turbid solutions, allowing for measurements on intact cells under physiological conditions. Cells were grown in phenol red free DMEM\/F-12 media with 15\u00a0mM HEPES and\u00a0l<\/span>-glutamine with 10% FBS and 400\u00a0\u03bcg\/mL G418 (or antibiotic-antimycotic, 1X, for HEK293 control cells). Cellular heme-depletion was carried out as described above. Cycloheximide (10\u00a0\u03bcg\/mL) was added to the cell culture media and cells were incubated with hemin (5\u00a0\u03bcM, 2\u00a0h), and\/or radicicol (40\u00a0\u03bcM, 2\u00a0h). After incubation each sample was normalized to 1\u00a0\u00d7\u00a0107<\/sup>\u00a0cells in 1\u00a0mL phenol red-free media. Using the phenol red free media as a reference the absorbance (350\u2013650\u00a0nm) of the live cell samples were read before and after addition of dithionite. Reduced minus oxidized spectra were plotted using GraphPad Prism v7.<\/p>\n<\/section>\n Cells were grown in phenol red free DMEM\/F-12 media with 15\u00a0mM HEPES and\u00a0l<\/span>-glutamine with 10% FBS and 400\u00a0\u03bcg\/mL G418 (or antibiotic-antimycotic, 1X, for HEK293 control cells). Cellular heme-depletion was carried out as described above. After treatment with cycloheximide, cells were re-plated into clear bottom white tissue culture-treated 96-well plates (Costar) at a density of 5\u00a0\u00d7\u00a0104<\/sup>\u00a0cells\/well. Radicicol and hemin were added at various timepoints and 400\u00a0\u03bcM L-012 (Wako Chemicals) was added 10\u00a0min prior to read. The NOX5 superoxide burst was initiated by automated addition of 1\u00a0\u03bcM ionomycin and luminescence was recorded every 10\u00a0s for 300\u00a0s on a FlexStation 3 microplate reader (Molecular Devices). Superoxide levels were also measured via the cytochrome c reduction assay. Cells were treated as described, but instead of L-012, 100\u00a0\u03bcM cytochrome c was added to the wells and absorbance at 550\u00a0nm was measured using a SpectraMax M2e plate reader (Molecular Devices). Signal from HEK293\u00a0cells that do not express NOX5 were subtracted from the signal from cells that stably express NOX5 and the rate of cytochrome c reduction (nmoles\/min\/106<\/sup>\u00a0cells) was calculated using the extinction coefficient for reduced cytochrome c of 21.1\u00a0mM-1<\/sup>\u00a0cm-1<\/sup>\u00a0[58<\/a>]. Superoxide levels were also measured using coelenterazine luminescence. Cells were treated as described, but instead of L-012, 50\u00a0\u03bcM coelenterazine was added to each well 10\u00a0min prior to read. Luminescence was measured as for L-012 and the signal from HEK293\u00a0cells that do not express NOX5 were subtracted from the signal from cells that stably express NOX5 for each treatment condition. Data were plotted and analyzed using GraphPad Prism v7.<\/p>\n<\/section>\n Co-immunoprecipitation was carried out using standards procedures. Cell lysates normalized to total protein content were incubated with anti-NOX5 antibody (Proteintech) followed by Protein A Sepharose 4B beads overnight at 4\u00a0\u00b0C with gentle rotation. After washing the precipitated protein was subjected to SDS-page and western blot analysis as described above.<\/p>\n<\/section>\n Proximity Ligation Assays (PLA, Duolink, Sigma) for co-localization were performed according to the manufacturer’s protocol using primary antibodies to Hsp90 (Abcam, 1:200) and NOX5 (Proteintech, 1:1000), followed by a pair of oligonucleotide-labeled secondary antibodies (included in Duolink Kit). The assay detects positive signal only when the epitopes of the target proteins are in close proximity (<40\u00a0nm). The signal from each of the detected pair of PLA probes was then imaged using fluorescence microscopy (excitation\/emission for Duolink red: 594\/624; excitation\/emission for Dapi: 360\/460). One or both primary antibodies were omitted for negative controls.<\/p>\n<\/section>\n HEK293\u00a0cells stably expressing NOX5 were incubated with hemin (5\u00a0\u03bcM, 2\u00a0h) or radicicol (40\u00a0\u03bcM, 2\u00a0h), then treated with 1\u00a0\u03bcM ionomycin or buffer control and immediately lysed. Lysates were prepared in sample buffer without reducing agent and heated at 65\u00a0\u00b0C for 2\u00a0min. Western blotting was performed as described above. Quantification was carried out using Image Lab v5.2.1. The total density of the high molecular weight oligomers was divided by the density of the monomer band. Each treatment condition was then normalized to the untreated oligomer\/monomer ratio for either the no ionomycin or 1\u00a0\u03bcM ionomycin sample sets.<\/p>\n<\/section>\n Statistical parameters including the exact value of n, the statistical test used to analyze the specific data set (two-tailed Student’s t-test or one-way anova with appropriate post-test), and the parameters for statistical significance are reported in the Figures and Figure Legends. Data is presented as means\u00a0\u00b1\u00a0SEM, and n represents biological replicates. Significance is denoted in the Figures with asterisks, and p-value cut-offs for the various statistical tests are listed in the Figure Legends (* denoting p\u00a0<\u00a00.05, **p\u00a0<\u00a00.01 and ***p\u00a0<\u00a00.001, for one-way anova, and *p\u00a0\u2264\u00a00.05, **p\u00a0<\u00a00.01, ***p\u00a0<\u00a00.0001 for two-tailed\u00a0t<\/em>-test). Statistical analyses were performed with GraphPad Prism 7.<\/p>\n2.\u00a0Materials and methods<\/h2>\n
2.2.\u00a0Cell culture and transient transfection<\/h3>\n
2.3.\u00a0Western blot analysis<\/h3>\n
2.4.\u00a0Labile heme measurements using a fluorescent heme sensor<\/h3>\n
2.5.\u00a0UV\u2013visible spectroscopy with Olis<\/a> Clarity<\/h3>\n
2.6.\u00a0Superoxide measurements<\/h3>\n
2.7.\u00a0Co-immunoprecipitation<\/h3>\n
2.8.\u00a0Proximity ligation assay with Duolink<\/h3>\n
2.9.\u00a0NOX5 oligomerization assays<\/h3>\n
2.10.\u00a0Quantification and statistical analysis<\/h3>\n